VMOL SEMINAR · FALL 2026
October 13: Everything Bagel in GNPS2
Join Yourae and Ming for a hands-on session with the new Everything Bagel feature finding tool.
Tuesday, October 13 · 8:30 AM Pacific / 17:30 Central Europe
Bring your data! We’ll work through it together.
Full schedule & past recordings ↗Nov 17 The local GNPS2go app
Dec 15 Feature-based Molecular Networking
One Tuesday per month through December. All sessions at 8:30 AM Pacific / 17:30 Central Europe.
The Everything Bagel Workflow
Feature finding and feature-based molecular networking, from raw LC-MS/MS data to molecular networks.
Read the preprint: Shin Y, El Abiead Y, Jarmusch AK, et al. The Everything Bagel Feature Finder: Ultra-fast automated feature finding for untargeted metabolomics. bioRxiv (2026).
GNPS2 Analysis Hub
Welcome to the GNPS2 Analysis Hub, a web-based mass spectrometry analysis platform. This is the central location for all GNPS2 tools and services.
GNPS2 is developed and maintained by the
Wang Bioinformatics Group
at UC Riverside. Please reach out if you have any questions and want to collaborate!
Workflows
- Workflow Server
- Explore Data
- Leverage Powerful Workflows
MASST Database
- Query All Public/Private Data
- Enrichment Analysis with Metadata
- Build Spectrum Context
Spectral Libraries
- Explore All Spectral Libraries
- Aggregated Public MS/MS spectra
- Visualize Spectra
Structure Dashboard
- Convert Structures
- Calculate Masses
Virtual Office Hours
- Interactive Feedback
- Free For Community
Public Tasks
- View All Public Tasks
- Shared Analyses
Spectrum Resolver
- View MS/MS Spectra
- Compare MS/MS Spectra
GNPS2 Dashboard
- View Full LCMS/GCMS
- Interactive in Web
Advanced Viz Tools
- Data Viz Dashboards
- Custom Data Selection
