flow_filelinking.yaml0000644000000000000000000000017214726451454013776 0ustar rootroot- parameter: input_spectra target: input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826 input_spectra/0000755000000000000000000000000014726451463012450 5ustar rootrootinput_spectra/usi_summary.tsv0000644000000000000000000000000014726451463015551 0ustar rootrootinput_spectra/usi_downloads/0000755000000000000000000000000014726451463015322 5ustar rootroot././@LongLink0000644000000000000000000000017000000000000011600 Kustar rootroot/data/nf_data/useruploads/smkosina/raw_data/egsb/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG018260000777000000000000000000000000014726451454044354 2/data/nf_data/useruploads/smkosina/raw_data/egsb/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag68ustar rootrootjob_dag.html0000644000000000000000000001266014726451502012042 0ustar rootroot Nextflow Cytoscape.js with Dagre

Nextflow Cytoscape.js with Dagre

job_parameters.yaml0000644000000000000000000000124114726451454013447 0ustar rootrootOMETAFLOW_SERVER: http://ometaflow-launchserver:4000 OMETALIBRARY_SERVER: http://ometalibrary-web:5000/library OMETAMASST_SERVER: http://ometamasst-web:5000/masst OMETATASK: a4cc328c16d94474af0af7eeacb3155e OMETAUSER: smkosina create_time: 2024-12-11 19:01:53 PST-0800 description: 20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826 File_Summary input_spectra: /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/input_spectra publishdir: /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e task: a4cc328c16d94474af0af7eeacb3155e usi: '' workflow_version: SERVER:2024.09.17;WORKFLOW:2024.08.20 workflowname: filesummary_workflow job_report.html0000644000000000000000001313102514726451502012623 0ustar rootroot [tender_marconi] Nextflow Workflow Report

Nextflow workflow report

[tender_marconi]

Workflow execution completed successfully!
Run times
12-Dec-2024 03:01:56 - 12-Dec-2024 03:02:15 (duration: 18.2s)
  3 succeeded  
  0 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run /app/workflows_user/filesummary_workflow/nf_workflow.nf -params-file /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_parameters.yaml -w /data/nf_data/server/nf_work/a4cc328c16d94474af0af7eeacb3155e -with-report /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_report.html -with-timeline /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_timeline.html -with-dag /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_dag.html -with-weblog 'http://localhost:4000/nf_weblog/a4cc328c16d94474af0af7eeacb3155e' -c /app/launchserver/nextflow.config
CPU-Hours
(a few seconds)
Launch directory
/data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e
Work directory
/data/nf_data/server/nf_work/a4cc328c16d94474af0af7eeacb3155e
Project directory
/app/workflows_user/filesummary_workflow
Script name
nf_workflow.nf
Script ID
c094e1b19434b57736c7a5a832c793da
Workflow session
b98ac829-074f-4877-bd96-23bcd811c48f
Workflow profile
standard
Nextflow version
version 21.10.0, build 5640 (11-11-2021 18:27 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)
job_timeline.html0000644000000000000000000075506714726451502013134 0ustar rootroot

Processes execution timeline

Launch time:
Elapsed time:
Legend: job wall time / memory usage (RAM)

nextflow_stdout.log0000644000000000000000000000342214726451502013536 0ustar rootrootN E X T F L O W ~ version 21.10.0 Launching `/app/workflows_user/filesummary_workflow/nf_workflow.nf` [tender_marconi] - revision: c094e1b194 [- ] process > prepInputFiles - [- ] process > filesummary_folder - [- ] process > includeUSI - executor > local (1) [a7/a6109b] process > prepInputFiles (1) [ 0%] 0 of 1 [- ] process > filesummary_folder - [- ] process > includeUSI - executor > local (1) [a7/a6109b] process > prepInputFiles (1) [ 0%] 0 of 1 [- ] process > filesummary_folder - [- ] process > includeUSI - executor > local (1) [a7/a6109b] process > prepInputFiles (1) [ 0%] 0 of 1 [- ] process > filesummary_folder [ 0%] 0 of 1 [- ] process > includeUSI - executor > local (2) [a7/a6109b] process > prepInputFiles (1) [100%] 1 of 1 ✔ [17/7fe8dd] process > filesummary_folder (1) [ 0%] 0 of 1 [- ] process > includeUSI - executor > local (3) [a7/a6109b] process > prepInputFiles (1) [100%] 1 of 1 ✔ [17/7fe8dd] process > filesummary_folder (1) [100%] 1 of 1 ✔ [95/d29e8c] process > includeUSI (1) [ 0%] 0 of 1 executor > local (3) [a7/a6109b] process > prepInputFiles (1) [100%] 1 of 1 ✔ [17/7fe8dd] process > filesummary_folder (1) [100%] 1 of 1 ✔ [95/d29e8c] process > includeUSI (1) [ 0%] 0 of 1 executor > local (3) [a7/a6109b] process > prepInputFiles (1) [100%] 1 of 1 ✔ [17/7fe8dd] process > filesummary_folder (1) [100%] 1 of 1 ✔ [95/d29e8c] process > includeUSI (1) [100%] 1 of 1 ✔ executor > local (3) [a7/a6109b] process > prepInputFiles (1) [100%] 1 of 1 ✔ [17/7fe8dd] process > filesummary_folder (1) [100%] 1 of 1 ✔ [95/d29e8c] process > includeUSI (1) [100%] 1 of 1 ✔ nf_cmd.sh0000644000000000000000000000115214726451454011351 0ustar rootrootnextflow run /app/workflows_user/filesummary_workflow/nf_workflow.nf -params-file /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_parameters.yaml -w /data/nf_data/server/nf_work/a4cc328c16d94474af0af7eeacb3155e -with-report /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_report.html -with-timeline /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_timeline.html -with-dag /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_dag.html -with-weblog http://localhost:4000/nf_weblog/a4cc328c16d94474af0af7eeacb3155e -c /app/launchserver/nextflow.confignf_output/0000755000000000000000000000000014726451501011604 5ustar rootrootnf_output/summaryresult_with_usi.tsv0000644000000000000000000007117014726451501017217 0ustar rootrootFilename Vendor Model MS1s MS2s input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR40__108.mzML Thermo Fisher Scientific Q Exactive 2026 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_30_ExCtrl-NA-NA_2__057.mzML Thermo Fisher Scientific Q Exactive 2415 4829 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_20_RootExu-Clay-Plant_4__110.mzML Thermo Fisher Scientific Q Exactive 2438 4875 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_18_RootExu-Clay-Plant_2__027.mzML Thermo Fisher Scientific Q Exactive 2457 4913 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR45__120.mzML Thermo Fisher Scientific Q Exactive 2023 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR34__091.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_16_RootExu-Sterilesoil-Plant_4__071.mzML Thermo Fisher Scientific Q Exactive 2462 4923 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_0_QC-SDM89-SOPv4_IR04__007.mzML Thermo Fisher Scientific Q Exactive 2423 4845 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR09__022.mzML Thermo Fisher Scientific Q Exactive 2055 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_23_RootExu-Sand-Plant_3__099.mzML Thermo Fisher Scientific Q Exactive 2459 4916 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR19__049.mzML Thermo Fisher Scientific Q Exactive 2052 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_2_RootExu-Semisolidagar-Plant_2__038.mzML Thermo Fisher Scientific Q Exactive 2441 4881 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_22_RootExu-Sand-Plant_2__087.mzML Thermo Fisher Scientific Q Exactive 2451 4901 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_18_RootExu-Clay-Plant_2__026.mzML Thermo Fisher Scientific Q Exactive 2444 4887 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_8_RootExu-Soilextract-Plant_4__024.mzML Thermo Fisher Scientific Q Exactive 2472 4943 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_14_RootExu-Sterilesoil-Plant_2__044.mzML Thermo Fisher Scientific Q Exactive 2445 4889 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR11__028.mzML Thermo Fisher Scientific Q Exactive 2055 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR23__061.mzML Thermo Fisher Scientific Q Exactive 2051 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_23_RootExu-Sand-Plant_3__098.mzML Thermo Fisher Scientific Q Exactive 2440 4879 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_13_RootExu-Sterilesoil-Plant_1__078.mzML Thermo Fisher Scientific Q Exactive 2493 4984 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_21_RootExu-Sand-Plant_1__017.mzML Thermo Fisher Scientific Q Exactive 2451 4901 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_20_RootExu-Clay-Plant_4__111.mzML Thermo Fisher Scientific Q Exactive 2450 4899 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_ISTD-SOPv5_IR01__008.mzML Thermo Fisher Scientific Q Exactive 2069 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR25__067.mzML Thermo Fisher Scientific Q Exactive 2051 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_0_QC-SDM89-SOPv4_IR03__006.mzML Thermo Fisher Scientific Q Exactive 2438 4874 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR20__052.mzML Thermo Fisher Scientific Q Exactive 2051 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR15__040.mzML Thermo Fisher Scientific Q Exactive 2052 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_10_RootExu-MSmedium-Plant_2__089.mzML Thermo Fisher Scientific Q Exactive 2441 4880 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_17_RootExu-Clay-Plant_1__101.mzML Thermo Fisher Scientific Q Exactive 2434 4867 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_1_RootExu-Semisolidagar-Plant_1__029.mzML Thermo Fisher Scientific Q Exactive 2443 4885 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_3_RootExu-Semisolidagar-Plant_3__050.mzML Thermo Fisher Scientific Q Exactive 2442 4882 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR06__013.mzML Thermo Fisher Scientific Q Exactive 2062 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR38__103.mzML Thermo Fisher Scientific Q Exactive 2045 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_22_RootExu-Sand-Plant_2__086.mzML Thermo Fisher Scientific Q Exactive 2437 4873 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR13__034.mzML Thermo Fisher Scientific Q Exactive 2053 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_26_TxCtrl-MSmedium-NoPlant_2__105.mzML Thermo Fisher Scientific Q Exactive 2439 4877 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_15_RootExu-Sterilesoil-Plant_3__096.mzML Thermo Fisher Scientific Q Exactive 2479 4957 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR26__070.mzML Thermo Fisher Scientific Q Exactive 2048 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_4_RootExu-Semisolidagar-Plant_4__065.mzML Thermo Fisher Scientific Q Exactive 2439 4877 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_12_RootExu-MSmedium-Plant_4__048.mzML Thermo Fisher Scientific Q Exactive 2453 4906 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR01__001.mzML Thermo Fisher Scientific Q Exactive 2065 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR09__117.mzML Thermo Fisher Scientific Q Exactive 2035 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_6_RootExu-Soilextract-Plant_2__020.mzML Thermo Fisher Scientific Q Exactive 2477 4954 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_29_ExCtrl-NA-NA_1__060.mzML Thermo Fisher Scientific Q Exactive 2415 4829 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR29__076.mzML Thermo Fisher Scientific Q Exactive 2028 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_6_RootExu-Soilextract-Plant_2__021.mzML Thermo Fisher Scientific Q Exactive 2472 4943 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_25_TxCtrl-MSmedium-NoPlant_1__011.mzML Thermo Fisher Scientific Q Exactive 2445 4888 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR12__031.mzML Thermo Fisher Scientific Q Exactive 2054 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR30__079.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_17_RootExu-Clay-Plant_1__102.mzML Thermo Fisher Scientific Q Exactive 2451 4901 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_31_ExCtrl-NA-NA_3__053.mzML Thermo Fisher Scientific Q Exactive 2405 4809 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_5_RootExu-Soilextract-Plant_1__032.mzML Thermo Fisher Scientific Q Exactive 2467 4933 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR05__010.mzML Thermo Fisher Scientific Q Exactive 2054 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR03__003.mzML Thermo Fisher Scientific Q Exactive 2068 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR02__005.mzML Thermo Fisher Scientific Q Exactive 2068 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_11_RootExu-MSmedium-Plant_3__063.mzML Thermo Fisher Scientific Q Exactive 2454 4907 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_16_RootExu-Sterilesoil-Plant_4__072.mzML Thermo Fisher Scientific Q Exactive 2497 4992 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_11_RootExu-MSmedium-Plant_3__062.mzML Thermo Fisher Scientific Q Exactive 2442 4883 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_8_RootExu-Soilextract-Plant_4__023.mzML Thermo Fisher Scientific Q Exactive 2469 4937 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR22__058.mzML Thermo Fisher Scientific Q Exactive 2052 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_7_RootExu-Soilextract-Plant_3__069.mzML Thermo Fisher Scientific Q Exactive 2475 4949 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR07__107.mzML Thermo Fisher Scientific Q Exactive 2036 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR10__025.mzML Thermo Fisher Scientific Q Exactive 2054 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR01__004.mzML Thermo Fisher Scientific Q Exactive 2071 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_ISTD-SOPv5_IR02__118.mzML Thermo Fisher Scientific Q Exactive 2028 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_28_TxCtrl-MSmedium-NoPlant_4__114.mzML Thermo Fisher Scientific Q Exactive 2433 4865 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR28__075.mzML Thermo Fisher Scientific Q Exactive 2029 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR44__119.mzML Thermo Fisher Scientific Q Exactive 2025 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_29_ExCtrl-NA-NA_1__059.mzML Thermo Fisher Scientific Q Exactive 2406 4811 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR14__037.mzML Thermo Fisher Scientific Q Exactive 2053 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR02__002.mzML Thermo Fisher Scientific Q Exactive 2075 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR24__064.mzML Thermo Fisher Scientific Q Exactive 2050 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_19_RootExu-Clay-Plant_3__015.mzML Thermo Fisher Scientific Q Exactive 2466 4930 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_2_RootExu-Semisolidagar-Plant_2__039.mzML Thermo Fisher Scientific Q Exactive 2458 4915 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_4_RootExu-Semisolidagar-Plant_4__066.mzML Thermo Fisher Scientific Q Exactive 2459 4917 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR36__097.mzML Thermo Fisher Scientific Q Exactive 2045 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_19_RootExu-Clay-Plant_3__014.mzML Thermo Fisher Scientific Q Exactive 2453 4905 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_27_TxCtrl-MSmedium-NoPlant_3__081.mzML Thermo Fisher Scientific Q Exactive 2435 4869 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR21__055.mzML Thermo Fisher Scientific Q Exactive 2052 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR35__094.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_1_RootExu-Semisolidagar-Plant_1__030.mzML Thermo Fisher Scientific Q Exactive 2457 4913 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_26_TxCtrl-MSmedium-NoPlant_2__104.mzML Thermo Fisher Scientific Q Exactive 2425 4849 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR42__112.mzML Thermo Fisher Scientific Q Exactive 2042 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR05__041.mzML Thermo Fisher Scientific Q Exactive 2044 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_7_RootExu-Soilextract-Plant_3__068.mzML Thermo Fisher Scientific Q Exactive 2468 4936 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR32__085.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_13_RootExu-Sterilesoil-Plant_1__077.mzML Thermo Fisher Scientific Q Exactive 2465 4929 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_25_TxCtrl-MSmedium-NoPlant_1__012.mzML Thermo Fisher Scientific Q Exactive 2447 4893 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR04__009.mzML Thermo Fisher Scientific Q Exactive 2055 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR43__115.mzML Thermo Fisher Scientific Q Exactive 2043 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_24_RootExu-Sand-Plant_4__083.mzML Thermo Fisher Scientific Q Exactive 2444 4887 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_9_RootExu-MSmedium-Plant_1__092.mzML Thermo Fisher Scientific Q Exactive 2434 4867 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR06__074.mzML Thermo Fisher Scientific Q Exactive 2040 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_24_RootExu-Sand-Plant_4__084.mzML Thermo Fisher Scientific Q Exactive 2458 4915 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_12_RootExu-MSmedium-Plant_4__047.mzML Thermo Fisher Scientific Q Exactive 2441 4882 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_28_TxCtrl-MSmedium-NoPlant_4__113.mzML Thermo Fisher Scientific Q Exactive 2422 4843 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_15_RootExu-Sterilesoil-Plant_3__095.mzML Thermo Fisher Scientific Q Exactive 2449 4897 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_9_RootExu-MSmedium-Plant_1__093.mzML Thermo Fisher Scientific Q Exactive 2446 4891 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_27_TxCtrl-MSmedium-NoPlant_3__080.mzML Thermo Fisher Scientific Q Exactive 2423 4844 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR27__073.mzML Thermo Fisher Scientific Q Exactive 2048 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR08__019.mzML Thermo Fisher Scientific Q Exactive 2059 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR17__043.mzML Thermo Fisher Scientific Q Exactive 2034 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR41__109.mzML Thermo Fisher Scientific Q Exactive 2025 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_5_RootExu-Soilextract-Plant_1__033.mzML Thermo Fisher Scientific Q Exactive 2469 4936 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_30_ExCtrl-NA-NA_2__056.mzML Thermo Fisher Scientific Q Exactive 2405 4808 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_32_ExCtrl-NA-NA_4__036.mzML Thermo Fisher Scientific Q Exactive 2408 4815 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_10_RootExu-MSmedium-Plant_2__090.mzML Thermo Fisher Scientific Q Exactive 2451 4901 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR37__100.mzML Thermo Fisher Scientific Q Exactive 2045 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_31_ExCtrl-NA-NA_3__054.mzML Thermo Fisher Scientific Q Exactive 2412 4824 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_21_RootExu-Sand-Plant_1__018.mzML Thermo Fisher Scientific Q Exactive 2465 4928 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR39__106.mzML Thermo Fisher Scientific Q Exactive 2045 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_32_ExCtrl-NA-NA_4__035.mzML Thermo Fisher Scientific Q Exactive 2408 4815 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR31__082.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR08__116.mzML Thermo Fisher Scientific Q Exactive 2036 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR33__088.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR16__042.mzML Thermo Fisher Scientific Q Exactive 2034 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR18__046.mzML Thermo Fisher Scientific Q Exactive 2051 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR07__016.mzML Thermo Fisher Scientific Q Exactive 2059 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_3_RootExu-Semisolidagar-Plant_3__051.mzML Thermo Fisher Scientific Q Exactive 2457 4913 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_14_RootExu-Sterilesoil-Plant_2__045.mzML Thermo Fisher Scientific Q Exactive 2455 4909 nf_output/merged_results.tsv0000644000000000000000000007117014726451500015373 0ustar rootrootFilename Vendor Model MS1s MS2s input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR40__108.mzML Thermo Fisher Scientific Q Exactive 2026 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_30_ExCtrl-NA-NA_2__057.mzML Thermo Fisher Scientific Q Exactive 2415 4829 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_20_RootExu-Clay-Plant_4__110.mzML Thermo Fisher Scientific Q Exactive 2438 4875 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_18_RootExu-Clay-Plant_2__027.mzML Thermo Fisher Scientific Q Exactive 2457 4913 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR45__120.mzML Thermo Fisher Scientific Q Exactive 2023 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR34__091.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_16_RootExu-Sterilesoil-Plant_4__071.mzML Thermo Fisher Scientific Q Exactive 2462 4923 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_0_QC-SDM89-SOPv4_IR04__007.mzML Thermo Fisher Scientific Q Exactive 2423 4845 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR09__022.mzML Thermo Fisher Scientific Q Exactive 2055 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_23_RootExu-Sand-Plant_3__099.mzML Thermo Fisher Scientific Q Exactive 2459 4916 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR19__049.mzML Thermo Fisher Scientific Q Exactive 2052 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_2_RootExu-Semisolidagar-Plant_2__038.mzML Thermo Fisher Scientific Q Exactive 2441 4881 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_22_RootExu-Sand-Plant_2__087.mzML Thermo Fisher Scientific Q Exactive 2451 4901 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_18_RootExu-Clay-Plant_2__026.mzML Thermo Fisher Scientific Q Exactive 2444 4887 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_8_RootExu-Soilextract-Plant_4__024.mzML Thermo Fisher Scientific Q Exactive 2472 4943 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_14_RootExu-Sterilesoil-Plant_2__044.mzML Thermo Fisher Scientific Q Exactive 2445 4889 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR11__028.mzML Thermo Fisher Scientific Q Exactive 2055 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR23__061.mzML Thermo Fisher Scientific Q Exactive 2051 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_23_RootExu-Sand-Plant_3__098.mzML Thermo Fisher Scientific Q Exactive 2440 4879 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_13_RootExu-Sterilesoil-Plant_1__078.mzML Thermo Fisher Scientific Q Exactive 2493 4984 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_21_RootExu-Sand-Plant_1__017.mzML Thermo Fisher Scientific Q Exactive 2451 4901 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_20_RootExu-Clay-Plant_4__111.mzML Thermo Fisher Scientific Q Exactive 2450 4899 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_ISTD-SOPv5_IR01__008.mzML Thermo Fisher Scientific Q Exactive 2069 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR25__067.mzML Thermo Fisher Scientific Q Exactive 2051 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_0_QC-SDM89-SOPv4_IR03__006.mzML Thermo Fisher Scientific Q Exactive 2438 4874 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR20__052.mzML Thermo Fisher Scientific Q Exactive 2051 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR15__040.mzML Thermo Fisher Scientific Q Exactive 2052 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_10_RootExu-MSmedium-Plant_2__089.mzML Thermo Fisher Scientific Q Exactive 2441 4880 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_17_RootExu-Clay-Plant_1__101.mzML Thermo Fisher Scientific Q Exactive 2434 4867 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_1_RootExu-Semisolidagar-Plant_1__029.mzML Thermo Fisher Scientific Q Exactive 2443 4885 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_3_RootExu-Semisolidagar-Plant_3__050.mzML Thermo Fisher Scientific Q Exactive 2442 4882 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR06__013.mzML Thermo Fisher Scientific Q Exactive 2062 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR38__103.mzML Thermo Fisher Scientific Q Exactive 2045 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_22_RootExu-Sand-Plant_2__086.mzML Thermo Fisher Scientific Q Exactive 2437 4873 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR13__034.mzML Thermo Fisher Scientific Q Exactive 2053 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_26_TxCtrl-MSmedium-NoPlant_2__105.mzML Thermo Fisher Scientific Q Exactive 2439 4877 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_15_RootExu-Sterilesoil-Plant_3__096.mzML Thermo Fisher Scientific Q Exactive 2479 4957 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR26__070.mzML Thermo Fisher Scientific Q Exactive 2048 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_4_RootExu-Semisolidagar-Plant_4__065.mzML Thermo Fisher Scientific Q Exactive 2439 4877 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_12_RootExu-MSmedium-Plant_4__048.mzML Thermo Fisher Scientific Q Exactive 2453 4906 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR01__001.mzML Thermo Fisher Scientific Q Exactive 2065 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR09__117.mzML Thermo Fisher Scientific Q Exactive 2035 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_6_RootExu-Soilextract-Plant_2__020.mzML Thermo Fisher Scientific Q Exactive 2477 4954 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_29_ExCtrl-NA-NA_1__060.mzML Thermo Fisher Scientific Q Exactive 2415 4829 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR29__076.mzML Thermo Fisher Scientific Q Exactive 2028 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_6_RootExu-Soilextract-Plant_2__021.mzML Thermo Fisher Scientific Q Exactive 2472 4943 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_25_TxCtrl-MSmedium-NoPlant_1__011.mzML Thermo Fisher Scientific Q Exactive 2445 4888 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR12__031.mzML Thermo Fisher Scientific Q Exactive 2054 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR30__079.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_17_RootExu-Clay-Plant_1__102.mzML Thermo Fisher Scientific Q Exactive 2451 4901 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_31_ExCtrl-NA-NA_3__053.mzML Thermo Fisher Scientific Q Exactive 2405 4809 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_5_RootExu-Soilextract-Plant_1__032.mzML Thermo Fisher Scientific Q Exactive 2467 4933 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR05__010.mzML Thermo Fisher Scientific Q Exactive 2054 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR03__003.mzML Thermo Fisher Scientific Q Exactive 2068 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR02__005.mzML Thermo Fisher Scientific Q Exactive 2068 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_11_RootExu-MSmedium-Plant_3__063.mzML Thermo Fisher Scientific Q Exactive 2454 4907 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_16_RootExu-Sterilesoil-Plant_4__072.mzML Thermo Fisher Scientific Q Exactive 2497 4992 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_11_RootExu-MSmedium-Plant_3__062.mzML Thermo Fisher Scientific Q Exactive 2442 4883 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_8_RootExu-Soilextract-Plant_4__023.mzML Thermo Fisher Scientific Q Exactive 2469 4937 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR22__058.mzML Thermo Fisher Scientific Q Exactive 2052 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_7_RootExu-Soilextract-Plant_3__069.mzML Thermo Fisher Scientific Q Exactive 2475 4949 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR07__107.mzML Thermo Fisher Scientific Q Exactive 2036 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR10__025.mzML Thermo Fisher Scientific Q Exactive 2054 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR01__004.mzML Thermo Fisher Scientific Q Exactive 2071 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_ISTD-SOPv5_IR02__118.mzML Thermo Fisher Scientific Q Exactive 2028 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_28_TxCtrl-MSmedium-NoPlant_4__114.mzML Thermo Fisher Scientific Q Exactive 2433 4865 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR28__075.mzML Thermo Fisher Scientific Q Exactive 2029 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR44__119.mzML Thermo Fisher Scientific Q Exactive 2025 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_29_ExCtrl-NA-NA_1__059.mzML Thermo Fisher Scientific Q Exactive 2406 4811 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR14__037.mzML Thermo Fisher Scientific Q Exactive 2053 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR02__002.mzML Thermo Fisher Scientific Q Exactive 2075 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR24__064.mzML Thermo Fisher Scientific Q Exactive 2050 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_19_RootExu-Clay-Plant_3__015.mzML Thermo Fisher Scientific Q Exactive 2466 4930 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_2_RootExu-Semisolidagar-Plant_2__039.mzML Thermo Fisher Scientific Q Exactive 2458 4915 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_4_RootExu-Semisolidagar-Plant_4__066.mzML Thermo Fisher Scientific Q Exactive 2459 4917 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR36__097.mzML Thermo Fisher Scientific Q Exactive 2045 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_19_RootExu-Clay-Plant_3__014.mzML Thermo Fisher Scientific Q Exactive 2453 4905 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_27_TxCtrl-MSmedium-NoPlant_3__081.mzML Thermo Fisher Scientific Q Exactive 2435 4869 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR21__055.mzML Thermo Fisher Scientific Q Exactive 2052 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR35__094.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_1_RootExu-Semisolidagar-Plant_1__030.mzML Thermo Fisher Scientific Q Exactive 2457 4913 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_26_TxCtrl-MSmedium-NoPlant_2__104.mzML Thermo Fisher Scientific Q Exactive 2425 4849 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR42__112.mzML Thermo Fisher Scientific Q Exactive 2042 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR05__041.mzML Thermo Fisher Scientific Q Exactive 2044 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_7_RootExu-Soilextract-Plant_3__068.mzML Thermo Fisher Scientific Q Exactive 2468 4936 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR32__085.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_13_RootExu-Sterilesoil-Plant_1__077.mzML Thermo Fisher Scientific Q Exactive 2465 4929 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_25_TxCtrl-MSmedium-NoPlant_1__012.mzML Thermo Fisher Scientific Q Exactive 2447 4893 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR04__009.mzML Thermo Fisher Scientific Q Exactive 2055 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR43__115.mzML Thermo Fisher Scientific Q Exactive 2043 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_24_RootExu-Sand-Plant_4__083.mzML Thermo Fisher Scientific Q Exactive 2444 4887 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_9_RootExu-MSmedium-Plant_1__092.mzML Thermo Fisher Scientific Q Exactive 2434 4867 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR06__074.mzML Thermo Fisher Scientific Q Exactive 2040 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_24_RootExu-Sand-Plant_4__084.mzML Thermo Fisher Scientific Q Exactive 2458 4915 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_12_RootExu-MSmedium-Plant_4__047.mzML Thermo Fisher Scientific Q Exactive 2441 4882 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_28_TxCtrl-MSmedium-NoPlant_4__113.mzML Thermo Fisher Scientific Q Exactive 2422 4843 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_15_RootExu-Sterilesoil-Plant_3__095.mzML Thermo Fisher Scientific Q Exactive 2449 4897 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_9_RootExu-MSmedium-Plant_1__093.mzML Thermo Fisher Scientific Q Exactive 2446 4891 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_27_TxCtrl-MSmedium-NoPlant_3__080.mzML Thermo Fisher Scientific Q Exactive 2423 4844 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR27__073.mzML Thermo Fisher Scientific Q Exactive 2048 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR08__019.mzML Thermo Fisher Scientific Q Exactive 2059 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR17__043.mzML Thermo Fisher Scientific Q Exactive 2034 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR41__109.mzML Thermo Fisher Scientific Q Exactive 2025 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_5_RootExu-Soilextract-Plant_1__033.mzML Thermo Fisher Scientific Q Exactive 2469 4936 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_30_ExCtrl-NA-NA_2__056.mzML Thermo Fisher Scientific Q Exactive 2405 4808 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_32_ExCtrl-NA-NA_4__036.mzML Thermo Fisher Scientific Q Exactive 2408 4815 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_10_RootExu-MSmedium-Plant_2__090.mzML Thermo Fisher Scientific Q Exactive 2451 4901 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR37__100.mzML Thermo Fisher Scientific Q Exactive 2045 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_31_ExCtrl-NA-NA_3__054.mzML Thermo Fisher Scientific Q Exactive 2412 4824 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_21_RootExu-Sand-Plant_1__018.mzML Thermo Fisher Scientific Q Exactive 2465 4928 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR39__106.mzML Thermo Fisher Scientific Q Exactive 2045 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_POS_MSMS-v2_32_ExCtrl-NA-NA_4__035.mzML Thermo Fisher Scientific Q Exactive 2408 4815 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR31__082.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_QC-SDM89-SOPv4_IR08__116.mzML Thermo Fisher Scientific Q Exactive 2036 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR33__088.mzML Thermo Fisher Scientific Q Exactive 2046 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR16__042.mzML Thermo Fisher Scientific Q Exactive 2034 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR18__046.mzML Thermo Fisher Scientific Q Exactive 2051 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_FPS_MS1_0_InjBl-MeOH_IR07__016.mzML Thermo Fisher Scientific Q Exactive 2059 0 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_3_RootExu-Semisolidagar-Plant_3__051.mzML Thermo Fisher Scientific Q Exactive 2457 4913 input_spectra/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826_NEG_MSMS-v2_14_RootExu-Sterilesoil-Plant_2__045.mzML Thermo Fisher Scientific Q Exactive 2455 4909 nf_resume_cmd.sh0000644000000000000000000000116214726451454012732 0ustar rootrootnextflow run /app/workflows_user/filesummary_workflow/nf_workflow.nf -params-file /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_parameters.yaml -w /data/nf_data/server/nf_work/a4cc328c16d94474af0af7eeacb3155e -with-report /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_report.html -with-timeline /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_timeline.html -with-dag /data/nf_data/server/nf_tasks/a4cc328c16d94474af0af7eeacb3155e/job_dag.html -resume -with-weblog http://localhost:4000/nf_weblog/a4cc328c16d94474af0af7eeacb3155e -c /app/launchserver/nextflow.configsubmission_parameters.yaml0000644000000000000000000000061714726451454015076 0ustar rootrootcreate_time: 2024-12-11 19:01:53 PST-0800 description: 20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826 File_Summary input_spectra: USERUPLOAD/smkosina/raw_data/egsb/20220322_AG_KZ_mCAFEcoPOD_TnSeq_20211115_QE144_Ag683775-924_USHXG01826 task: a4cc328c16d94474af0af7eeacb3155e usi: '' workflow_version: SERVER:2024.09.17;WORKFLOW:2024.08.20 workflowname: filesummary_workflow workflowdisplay.yaml0000644000000000000000000000253214726451454013716 0ustar rootrootname: filesummary_workflow displayname: STUFF Views: - name: Files Summary displayname: Files Summary viewname: filesummary displaytype: datatable parameters: filename: nf_output/summaryresult_with_usi.tsv columns: - title: "Visualize" data: - title: "Filename" data: "Filename" - title: "Public USI" data: "usi" - title: "Vendor" data: "Vendor" - title: "Model" data: "Model" - title: "MS1s" data: "MS1s" - title: "MS2s" data: "MS2s" columnDefs: '[ {"targets": 0,"data": null,"render": function ( data, type, row, meta ) { return ` View LCMS Run `;}}]' - name: USI Download Summary displayname: USI Download Summary viewname: usisummary displaytype: datatable parameters: filename: input_spectra/usi_summary.tsv columns: - title: "Public USI" data: "usi" - title: "target_path" data: "target_path" - title: "status" data: "status"