The exit status of the task that caused the workflow execution to fail was: 1.
The full error message was:
Error executing process > 'quantification_table_reformatted (1)' Caused by: Process `quantification_table_reformatted (1)` terminated with an error exit status (1) Command executed: python /app/workflows_user/feature_based_molecular_networking_workflow/bin/scripts/reformat_quantification.py MZMINE inputfeatures featuretable_reformated.csv inputspectra specs_ms.mgf --QUANT_FILE_NORM None Command exit status: 1 Command output: MZMINE Must input exactly 1 spectrum mgf file Command wrapper: MZMINE Must input exactly 1 spectrum mgf file Work dir: /data/nf_data/server/nf_work/86efa625033f49b5a6ce685fae6d1112/05/7f5e9dd06279743399022076f77ff9 Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh`
nextflow run /app/workflows_user/feature_based_molecular_networking_workflow/nf_workflow.nf -params-file /data/nf_data/server/nf_tasks/86efa625033f49b5a6ce685fae6d1112/job_parameters.yaml -w /data/nf_data/server/nf_work/86efa625033f49b5a6ce685fae6d1112 -with-report /data/nf_data/server/nf_tasks/86efa625033f49b5a6ce685fae6d1112/job_report.html -with-timeline /data/nf_data/server/nf_tasks/86efa625033f49b5a6ce685fae6d1112/job_timeline.html -with-dag /data/nf_data/server/nf_tasks/86efa625033f49b5a6ce685fae6d1112/job_dag.html -with-weblog 'http://localhost:4000/nf_weblog/86efa625033f49b5a6ce685fae6d1112' -c /app/launchserver/nextflow.config7e0a32c1a85f47d9d7b672580d0f54611f4db9a0-94f2-4acd-9d42-75b8bd6254b8These plots give an overview of the distribution of resource usage for each process.
This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.
Launch time:
Elapsed time:
Legend: job wall time / memory usage (RAM)