The exit status of the task that caused the workflow execution to fail was: 1.
The full error message was:
Error executing process > 'quantification_table_reformatted (1)' Caused by: Process `quantification_table_reformatted (1)` terminated with an error exit status (1) Command executed: python /app/workflows_user/feature_based_molecular_networking_workflow/bin/scripts/reformat_quantification.py MZMINE inputfeatures featuretable_reformated.csv inputspectra specs_ms.mgf --QUANT_FILE_NORM None Command exit status: 1 Command output: MZMINE Must input exactly 1 spectrum mgf file Command wrapper: MZMINE Must input exactly 1 spectrum mgf file Work dir: /data/nf_data/server/nf_work/16d7a72b3e1942f18b877f28cf88ca2b/c5/3ccfc35bcc8c700f934e3749b84cee Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`
nextflow run /app/workflows_user/feature_based_molecular_networking_workflow/nf_workflow.nf -params-file /data/nf_data/server/nf_tasks/16d7a72b3e1942f18b877f28cf88ca2b/job_parameters.yaml -w /data/nf_data/server/nf_work/16d7a72b3e1942f18b877f28cf88ca2b -with-report /data/nf_data/server/nf_tasks/16d7a72b3e1942f18b877f28cf88ca2b/job_report.html -with-timeline /data/nf_data/server/nf_tasks/16d7a72b3e1942f18b877f28cf88ca2b/job_timeline.html -with-dag /data/nf_data/server/nf_tasks/16d7a72b3e1942f18b877f28cf88ca2b/job_dag.html -with-weblog 'http://localhost:4000/nf_weblog/16d7a72b3e1942f18b877f28cf88ca2b' -c /app/launchserver/nextflow.config7e0a32c1a85f47d9d7b672580d0f5461e77fb332-b699-4600-a9ea-3d10b2745f2eThese plots give an overview of the distribution of resource usage for each process.
This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.
Launch time:
Elapsed time:
Legend: job wall time / memory usage (RAM)